Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Reep4-203ENSMUST00000226563 1444 ntBASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms