Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav9-1A0A075B601 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.87□□□□□ -0.19
Trav9-1A0A075B601 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Gm26571-201ENSMUST00000181399 666 ntBASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-1A0A075B601 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Gm6365-201ENSMUST00000054711 744 ntBASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-1A0A075B601 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-1A0A075B601 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9-1A0A075B601 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9-1A0A075B601 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms