Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trbv4A0A075B5I2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv4A0A075B5I2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv4A0A075B5I2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv4A0A075B5I2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv4A0A075B5I2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv4A0A075B5I2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv4A0A075B5I2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv4A0A075B5I2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv4A0A075B5I2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbv4A0A075B5I2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv4A0A075B5I2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms