Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl28Q9JIL2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl28Q9JIL2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl28Q9JIL2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccl28Q9JIL2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl28Q9JIL2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl28Q9JIL2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl28Q9JIL2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccl28Q9JIL2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl28Q9JIL2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl28Q9JIL2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl28Q9JIL2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl28Q9JIL2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl28Q9JIL2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl28Q9JIL2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl28Q9JIL2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccl28Q9JIL2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl28Q9JIL2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl28Q9JIL2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl28Q9JIL2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl28Q9JIL2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Ccl28Q9JIL2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl28Q9JIL2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl28Q9JIL2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl28Q9JIL2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl28Q9JIL2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl28Q9JIL2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ccl28Q9JIL2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl28Q9JIL2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl28Q9JIL2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl28Q9JIL2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl28Q9JIL2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl28Q9JIL2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl28Q9JIL2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl28Q9JIL2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl28Q9JIL2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl28Q9JIL2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl28Q9JIL2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccl28Q9JIL2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl28Q9JIL2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl28Q9JIL2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl28Q9JIL2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl28Q9JIL2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl28Q9JIL2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl28Q9JIL2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl28Q9JIL2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccl28Q9JIL2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl28Q9JIL2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccl28Q9JIL2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl28Q9JIL2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccl28Q9JIL2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl28Q9JIL2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl28Q9JIL2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl28Q9JIL2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.35■□□□□ 0.69
Ccl28Q9JIL2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl28Q9JIL2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccl28Q9JIL2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.34■□□□□ 0.69
Ccl28Q9JIL2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl28Q9JIL2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl28Q9JIL2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl28Q9JIL2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl28Q9JIL2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl28Q9JIL2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl28Q9JIL2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccl28Q9JIL2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl28Q9JIL2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccl28Q9JIL2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.3■□□□□ 0.68
Ccl28Q9JIL2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccl28Q9JIL2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl28Q9JIL2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl28Q9JIL2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl28Q9JIL2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl28Q9JIL2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl28Q9JIL2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl28Q9JIL2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccl28Q9JIL2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl28Q9JIL2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl28Q9JIL2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl28Q9JIL2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl28Q9JIL2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.21■□□□□ 0.67
Ccl28Q9JIL2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl28Q9JIL2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl28Q9JIL2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl28Q9JIL2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl28Q9JIL2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccl28Q9JIL2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Ccl28Q9JIL2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Zfp131-205ENSMUST00000223812 663 ntBASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl28Q9JIL2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccl28Q9JIL2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms