Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lgi3Q8K406 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgi3Q8K406 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lgi3Q8K406 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgi3Q8K406 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lgi3Q8K406 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lgi3Q8K406 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lgi3Q8K406 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lgi3Q8K406 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lgi3Q8K406 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
Lgi3Q8K406 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lgi3Q8K406 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lgi3Q8K406 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lgi3Q8K406 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lgi3Q8K406 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgi3Q8K406 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lgi3Q8K406 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lgi3Q8K406 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Lgi3Q8K406 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lgi3Q8K406 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.68■□□□□ 0.9
Lgi3Q8K406 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lgi3Q8K406 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lgi3Q8K406 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lgi3Q8K406 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lgi3Q8K406 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lgi3Q8K406 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lgi3Q8K406 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lgi3Q8K406 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lgi3Q8K406 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lgi3Q8K406 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lgi3Q8K406 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lgi3Q8K406 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lgi3Q8K406 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.63■□□□□ 0.89
Lgi3Q8K406 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lgi3Q8K406 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lgi3Q8K406 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lgi3Q8K406 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lgi3Q8K406 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lgi3Q8K406 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.6■□□□□ 0.89
Lgi3Q8K406 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.6■□□□□ 0.89
Lgi3Q8K406 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Lgi3Q8K406 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lgi3Q8K406 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lgi3Q8K406 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Lgi3Q8K406 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lgi3Q8K406 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lgi3Q8K406 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lgi3Q8K406 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lgi3Q8K406 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.57■□□□□ 0.88
Lgi3Q8K406 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lgi3Q8K406 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lgi3Q8K406 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lgi3Q8K406 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lgi3Q8K406 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lgi3Q8K406 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lgi3Q8K406 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lgi3Q8K406 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lgi3Q8K406 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lgi3Q8K406 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lgi3Q8K406 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
Lgi3Q8K406 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.53■□□□□ 0.88
Lgi3Q8K406 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lgi3Q8K406 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lgi3Q8K406 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
Lgi3Q8K406 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lgi3Q8K406 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lgi3Q8K406 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lgi3Q8K406 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lgi3Q8K406 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lgi3Q8K406 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lgi3Q8K406 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lgi3Q8K406 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lgi3Q8K406 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lgi3Q8K406 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lgi3Q8K406 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lgi3Q8K406 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lgi3Q8K406 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lgi3Q8K406 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lgi3Q8K406 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lgi3Q8K406 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lgi3Q8K406 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.4■□□□□ 0.86
Lgi3Q8K406 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.4■□□□□ 0.86
Lgi3Q8K406 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lgi3Q8K406 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lgi3Q8K406 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lgi3Q8K406 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lgi3Q8K406 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lgi3Q8K406 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lgi3Q8K406 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Lgi3Q8K406 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms