Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx4P53776 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.33■□□□□ 0.85
Lhx4P53776 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.32■□□□□ 0.84
Lhx4P53776 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.32■□□□□ 0.84
Lhx4P53776 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx4P53776 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx4P53776 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx4P53776 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx4P53776 Amer2-203ENSMUST00000225247 2662 ntBASIC20.3■□□□□ 0.84
Lhx4P53776 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx4P53776 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx4P53776 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx4P53776 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx4P53776 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.29■□□□□ 0.84
Lhx4P53776 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.29■□□□□ 0.84
Lhx4P53776 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Lhx4P53776 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx4P53776 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx4P53776 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx4P53776 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx4P53776 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.27■□□□□ 0.84
Lhx4P53776 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx4P53776 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx4P53776 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Lhx4P53776 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx4P53776 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx4P53776 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx4P53776 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx4P53776 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Lhx4P53776 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx4P53776 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx4P53776 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx4P53776 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx4P53776 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx4P53776 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.24■□□□□ 0.83
Lhx4P53776 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx4P53776 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Lhx4P53776 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.23■□□□□ 0.83
Lhx4P53776 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.23■□□□□ 0.83
Lhx4P53776 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx4P53776 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx4P53776 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx4P53776 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx4P53776 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.21■□□□□ 0.83
Lhx4P53776 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.2■□□□□ 0.82
Lhx4P53776 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lhx4P53776 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx4P53776 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx4P53776 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx4P53776 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx4P53776 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx4P53776 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx4P53776 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx4P53776 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.19■□□□□ 0.82
Lhx4P53776 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lhx4P53776 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx4P53776 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx4P53776 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx4P53776 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx4P53776 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.15■□□□□ 0.82
Lhx4P53776 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
Lhx4P53776 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx4P53776 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lhx4P53776 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx4P53776 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx4P53776 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx4P53776 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx4P53776 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lhx4P53776 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx4P53776 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx4P53776 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx4P53776 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx4P53776 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx4P53776 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.08■□□□□ 0.81
Lhx4P53776 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx4P53776 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx4P53776 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx4P53776 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lhx4P53776 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx4P53776 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx4P53776 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx4P53776 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.06■□□□□ 0.8
Lhx4P53776 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx4P53776 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx4P53776 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lhx4P53776 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx4P53776 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx4P53776 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx4P53776 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lhx4P53776 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx4P53776 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.04■□□□□ 0.8
Lhx4P53776 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx4P53776 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx4P53776 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.03■□□□□ 0.8
Lhx4P53776 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.03■□□□□ 0.8
Lhx4P53776 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx4P53776 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx4P53776 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx4P53776 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx4P53776 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms