Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccl9P51670 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccl9P51670 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccl9P51670 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl9P51670 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl9P51670 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl9P51670 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl9P51670 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccl9P51670 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccl9P51670 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccl9P51670 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl9P51670 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.14■□□□□ 0.98
Ccl9P51670 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccl9P51670 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.14■□□□□ 0.98
Ccl9P51670 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl9P51670 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl9P51670 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl9P51670 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl9P51670 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl9P51670 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccl9P51670 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccl9P51670 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl9P51670 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.1■□□□□ 0.97
Ccl9P51670 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl9P51670 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccl9P51670 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl9P51670 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccl9P51670 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccl9P51670 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccl9P51670 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccl9P51670 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ccl9P51670 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl9P51670 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl9P51670 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccl9P51670 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Ccl9P51670 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl9P51670 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl9P51670 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl9P51670 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccl9P51670 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl9P51670 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl9P51670 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl9P51670 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl9P51670 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl9P51670 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl9P51670 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl9P51670 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl9P51670 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl9P51670 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.01■□□□□ 0.95
Ccl9P51670 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl9P51670 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl9P51670 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccl9P51670 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl9P51670 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.99■□□□□ 0.95
Ccl9P51670 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccl9P51670 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccl9P51670 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccl9P51670 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl9P51670 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl9P51670 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl9P51670 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccl9P51670 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccl9P51670 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.95■□□□□ 0.94
Ccl9P51670 Zfp131-205ENSMUST00000223812 663 ntBASIC20.95■□□□□ 0.94
Ccl9P51670 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ccl9P51670 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccl9P51670 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccl9P51670 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccl9P51670 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.94■□□□□ 0.94
Ccl9P51670 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.94■□□□□ 0.94
Ccl9P51670 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.94■□□□□ 0.94
Ccl9P51670 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccl9P51670 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccl9P51670 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccl9P51670 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccl9P51670 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.91■□□□□ 0.94
Ccl9P51670 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccl9P51670 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Ccl9P51670 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccl9P51670 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
Ccl9P51670 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccl9P51670 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.89■□□□□ 0.93
Ccl9P51670 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccl9P51670 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccl9P51670 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccl9P51670 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccl9P51670 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccl9P51670 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ccl9P51670 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccl9P51670 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccl9P51670 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ccl9P51670 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccl9P51670 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccl9P51670 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccl9P51670 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccl9P51670 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccl9P51670 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccl9P51670 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccl9P51670 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccl9P51670 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms