Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-7A0A075B6B0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav6d-7A0A075B6B0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-7A0A075B6B0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.54■□□□□ 0.56
Trav6d-7A0A075B6B0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-7A0A075B6B0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6d-7A0A075B6B0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6d-7A0A075B6B0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.52■□□□□ 0.56
Trav6d-7A0A075B6B0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6d-7A0A075B6B0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav6d-7A0A075B6B0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.51■□□□□ 0.55
Trav6d-7A0A075B6B0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6d-7A0A075B6B0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-7A0A075B6B0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-7A0A075B6B0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-7A0A075B6B0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-7A0A075B6B0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-7A0A075B6B0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-7A0A075B6B0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6d-7A0A075B6B0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6d-7A0A075B6B0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6d-7A0A075B6B0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav6d-7A0A075B6B0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav6d-7A0A075B6B0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6d-7A0A075B6B0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6d-7A0A075B6B0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav6d-7A0A075B6B0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-7A0A075B6B0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav6d-7A0A075B6B0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-7A0A075B6B0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trav6d-7A0A075B6B0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-7A0A075B6B0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-7A0A075B6B0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-7A0A075B6B0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav6d-7A0A075B6B0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-7A0A075B6B0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-7A0A075B6B0 Gm24970-201ENSMUST00000175582 82 ntBASIC18.4■□□□□ 0.54
Trav6d-7A0A075B6B0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.4■□□□□ 0.54
Trav6d-7A0A075B6B0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav6d-7A0A075B6B0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav6d-7A0A075B6B0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6d-7A0A075B6B0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav6d-7A0A075B6B0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-7A0A075B6B0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav6d-7A0A075B6B0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-7A0A075B6B0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-7A0A075B6B0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6d-7A0A075B6B0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6d-7A0A075B6B0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav6d-7A0A075B6B0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-7A0A075B6B0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trav6d-7A0A075B6B0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trav6d-7A0A075B6B0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav6d-7A0A075B6B0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-7A0A075B6B0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-7A0A075B6B0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-7A0A075B6B0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-7A0A075B6B0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-7A0A075B6B0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-7A0A075B6B0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms