Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm18969-201ENSMUST00000189423 730 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm19231-201ENSMUST00000193212 830 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm37681-201ENSMUST00000193880 727 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm2142-201ENSMUST00000197899 589 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm43629-201ENSMUST00000201782 704 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm19921-201ENSMUST00000210505 703 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm10064-201ENSMUST00000071235 399 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm23330-201ENSMUST00000082660 164 ntBASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim3Q9R1R2 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm13681-201ENSMUST00000117925 210 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm4342-201ENSMUST00000118982 367 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm14874-201ENSMUST00000118995 438 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm13162-201ENSMUST00000121481 454 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm24382-201ENSMUST00000122698 107 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm18728-201ENSMUST00000186155 753 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm38670-201ENSMUST00000199248 77 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm44132-201ENSMUST00000205142 151 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm45700-201ENSMUST00000205866 347 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm9269-201ENSMUST00000221661 578 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim3Q9R1R2 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm26067-201ENSMUST00000103789 110 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm13579-201ENSMUST00000118519 517 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm11481-201ENSMUST00000120069 255 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm26086-201ENSMUST00000157902 263 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms