Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Mir3572-201ENSMUST00000175549 86 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm19029-201ENSMUST00000189923 564 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm43655-201ENSMUST00000197367 222 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 LOC665443-201ENSMUST00000212284 796 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm5750-201ENSMUST00000218711 801 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm26063-201ENSMUST00000083378 107 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm14086-201ENSMUST00000117152 173 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm14335-201ENSMUST00000119165 810 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm25430-201ENSMUST00000157614 289 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm23318-201ENSMUST00000158000 108 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Scarna13-201ENSMUST00000158164 275 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm26172-201ENSMUST00000158421 134 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm36939-201ENSMUST00000194889 439 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm6261-201ENSMUST00000204707 760 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm8039-201ENSMUST00000204758 712 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm45700-201ENSMUST00000205866 347 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm10064-201ENSMUST00000071235 399 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Gm22456-201ENSMUST00000082578 125 ntBASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lima1Q9ERG0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Mir290a-201ENSMUST00000104627 83 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm13579-201ENSMUST00000118519 517 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm11742-201ENSMUST00000119903 233 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm14619-201ENSMUST00000120480 168 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm12936-201ENSMUST00000121439 301 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm3076-201ENSMUST00000161613 451 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm38217-201ENSMUST00000194358 910 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm9480-201ENSMUST00000198038 616 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm35648-201ENSMUST00000202304 475 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms