Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm11561-201ENSMUST00000117429 417 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm14621-201ENSMUST00000117709 689 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm11510-201ENSMUST00000120278 347 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm12267-201ENSMUST00000121609 761 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm25291-201ENSMUST00000122795 144 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm26086-201ENSMUST00000157902 263 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm29159-201ENSMUST00000187969 379 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Clec2j-202ENSMUST00000203658 606 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm6230-201ENSMUST00000208077 780 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm45777-201ENSMUST00000213009 301 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Gm25005-201ENSMUST00000083812 156 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps28Q9D1C8 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Vps28Q9D1C8 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm26067-201ENSMUST00000103789 110 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm11270-201ENSMUST00000117685 471 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm8424-201ENSMUST00000117716 988 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm4342-201ENSMUST00000118982 367 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm14521-201ENSMUST00000119545 350 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm26172-201ENSMUST00000158421 134 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Mir6539-201ENSMUST00000183732 110 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Mir7235-201ENSMUST00000183796 56 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm38040-201ENSMUST00000193505 225 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm17952-201ENSMUST00000193914 747 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm37908-201ENSMUST00000195828 470 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm4928-201ENSMUST00000219622 850 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm9269-201ENSMUST00000221661 578 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm24917-201ENSMUST00000083935 104 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps28Q9D1C8 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms