Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm22103-201ENSMUST00000116733 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm26475-201ENSMUST00000116769 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm23620-201ENSMUST00000116812 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm25042-201ENSMUST00000116856 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm25540-201ENSMUST00000116880 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm12016-201ENSMUST00000119079 681 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm13170-201ENSMUST00000119716 643 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm14237-201ENSMUST00000122080 430 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm23883-201ENSMUST00000122686 290 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm14651-201ENSMUST00000147192 442 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm22080-201ENSMUST00000157591 106 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm9593-201ENSMUST00000166034 469 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm23550-201ENSMUST00000179003 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm25123-201ENSMUST00000179154 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm25353-201ENSMUST00000179366 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm22992-201ENSMUST00000179496 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm25892-201ENSMUST00000179867 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm24092-201ENSMUST00000180257 121 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm28802-201ENSMUST00000188624 944 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm4332-201ENSMUST00000196114 346 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm43743-202ENSMUST00000198353 491 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm19936-201ENSMUST00000216414 838 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm7240-201ENSMUST00000220769 664 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.92□□□□□ -1.3
Clp1Q99LI9 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clp1Q99LI9 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clp1Q99LI9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clp1Q99LI9 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.91□□□□□ -1.3
Clp1Q99LI9 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.91□□□□□ -1.3
Clp1Q99LI9 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.91□□□□□ -1.3
Clp1Q99LI9 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms