Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm22372-201ENSMUST00000104589 136 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm12422-201ENSMUST00000121431 302 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm22596-201ENSMUST00000157601 316 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm8256-201ENSMUST00000169178 453 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm37609-201ENSMUST00000191778 678 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm29813-201ENSMUST00000195856 447 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm44277-201ENSMUST00000205128 649 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm45259-201ENSMUST00000209217 1006 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm23302-201ENSMUST00000082710 100 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm25139-201ENSMUST00000083247 210 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Olfr519-201ENSMUST00000084752 960 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm2223-201ENSMUST00000112099 1350 ntBASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nup35Q8R4R6 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm17014-201ENSMUST00000120765 168 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm22958-201ENSMUST00000122512 184 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm25117-201ENSMUST00000157194 144 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm22223-201ENSMUST00000157360 125 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm23121-201ENSMUST00000157653 173 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm22655-201ENSMUST00000174949 96 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm27854-201ENSMUST00000175578 244 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm8614-201ENSMUST00000182528 978 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm27887-201ENSMUST00000184367 102 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm18952-201ENSMUST00000194471 846 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Igkv4-75-201ENSMUST00000197204 359 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup35Q8R4R6 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
Nup35Q8R4R6 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms