Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm11905-201ENSMUST00000117653 678 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm11369-201ENSMUST00000120812 318 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm11797-201ENSMUST00000121336 754 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm14253-201ENSMUST00000122112 639 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm37719-201ENSMUST00000194615 292 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm37845-201ENSMUST00000194977 355 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Mir6516-201ENSMUST00000196236 110 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm4602-201ENSMUST00000203198 308 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm8039-201ENSMUST00000204758 712 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 AC167977.2-201ENSMUST00000225676 682 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm22575-201ENSMUST00000082981 110 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.61□□□□□ -1.35
Brf1Q8CFK2 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm11699-201ENSMUST00000119016 401 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm11278-201ENSMUST00000121002 997 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm12807-201ENSMUST00000121546 962 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm24065-201ENSMUST00000157487 264 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm26172-201ENSMUST00000158421 134 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm15812-201ENSMUST00000162331 748 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm2966-201ENSMUST00000166052 481 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm17204-201ENSMUST00000167936 478 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms