Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm11625-201ENSMUST00000119535 296 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm18128-201ENSMUST00000172625 511 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm8614-201ENSMUST00000182528 978 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm8599-201ENSMUST00000193033 457 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm43350-201ENSMUST00000196382 711 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Gm43136-201ENSMUST00000200403 636 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a6Q8C6K9 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm38372-201ENSMUST00000194854 4028 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm43496-201ENSMUST00000201682 3001 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm13745-201ENSMUST00000121994 527 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Mir7222-201ENSMUST00000183740 75 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm10048-201ENSMUST00000194196 372 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm18329-201ENSMUST00000215832 589 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Col6a6Q8C6K9 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm42676-201ENSMUST00000197609 2686 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm11584-201ENSMUST00000120636 325 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm26034-201ENSMUST00000158154 116 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm4845-201ENSMUST00000179202 562 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Mir7074-201ENSMUST00000183884 63 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm44307-201ENSMUST00000204466 764 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a6Q8C6K9 Gm11617-201ENSMUST00000119609 639 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm13737-201ENSMUST00000119793 232 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm25224-201ENSMUST00000158195 68 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Mir6516-201ENSMUST00000196236 110 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm45209-201ENSMUST00000207122 353 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm18508-201ENSMUST00000215790 1642 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm11822-201ENSMUST00000119177 415 ntBASIC4.63□□□□□ -1.67
Col6a6Q8C6K9 Gm12281-201ENSMUST00000119536 298 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms