Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim35Q8C006 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim35Q8C006 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim35Q8C006 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim35Q8C006 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Trim35Q8C006 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm42899-201ENSMUST00000197034 2667 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm38091-201ENSMUST00000192418 3871 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm4275-205ENSMUST00000212624 1436 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm37802-201ENSMUST00000194998 2643 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Rorc-202ENSMUST00000197040 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm25803-201ENSMUST00000104419 131 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm12385-201ENSMUST00000117439 795 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm5381-201ENSMUST00000117975 1250 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm15896-201ENSMUST00000118045 440 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm5388-201ENSMUST00000120059 1117 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm26028-201ENSMUST00000158660 294 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm16125-201ENSMUST00000159003 339 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm26585-201ENSMUST00000180890 630 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm27014-201ENSMUST00000182658 937 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm5256-201ENSMUST00000191412 877 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm37841-201ENSMUST00000195367 376 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm5857-201ENSMUST00000198953 493 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm43975-201ENSMUST00000203023 481 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm7565-201ENSMUST00000203611 623 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm45146-201ENSMUST00000207108 221 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm44533-201ENSMUST00000207782 268 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm9068-201ENSMUST00000217393 455 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim35Q8C006 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 AC211878.7-201ENSMUST00000222851 661 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim35Q8C006 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim35Q8C006 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Ctnna3-201ENSMUST00000075099 2688 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.38□□□□□ -1.07
Trim35Q8C006 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim35Q8C006 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim35Q8C006 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm10286-201ENSMUST00000093603 5077 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm24160-201ENSMUST00000104594 126 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm11935-201ENSMUST00000118608 399 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm14933-201ENSMUST00000118840 481 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm11295-201ENSMUST00000121379 803 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm6285-201ENSMUST00000122012 498 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm26070-201ENSMUST00000157500 137 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm20797-201ENSMUST00000177894 383 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm24862-201ENSMUST00000179103 79 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm23310-201ENSMUST00000179105 79 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm25461-201ENSMUST00000179293 79 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm27414-201ENSMUST00000185033 381 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim35Q8C006 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC8.37□□□□□ -1.07
Trim35Q8C006 Gm37477-201ENSMUST00000195215 884 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms