Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm13077-201ENSMUST00000121941 484 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm20453-201ENSMUST00000173968 226 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm22111-201ENSMUST00000178010 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm23687-201ENSMUST00000178664 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm24566-201ENSMUST00000179286 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm23305-201ENSMUST00000179342 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm26389-201ENSMUST00000179819 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm22130-201ENSMUST00000179979 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm22393-201ENSMUST00000180153 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm25085-201ENSMUST00000180298 79 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm27044-201ENSMUST00000183033 796 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm27541-201ENSMUST00000184078 122 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm28385-201ENSMUST00000185671 292 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm28683-201ENSMUST00000187134 615 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm28840-205ENSMUST00000189320 615 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm28835-203ENSMUST00000190062 615 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm19739-201ENSMUST00000195941 153 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm17775-201ENSMUST00000198542 258 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm6070-201ENSMUST00000207275 419 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm17911-201ENSMUST00000210806 877 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm45789-201ENSMUST00000213038 364 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm5457-201ENSMUST00000022260 333 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx55Q6ZPL9 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm14769-201ENSMUST00000118590 432 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm13118-201ENSMUST00000120402 549 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm11909-201ENSMUST00000121424 759 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm12444-201ENSMUST00000121512 877 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm12807-201ENSMUST00000121546 962 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm3160-201ENSMUST00000128343 607 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm44370-201ENSMUST00000175436 112 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm43467-201ENSMUST00000197441 437 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm44580-201ENSMUST00000206333 877 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm18601-201ENSMUST00000220831 634 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Mir342-201ENSMUST00000083502 99 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.45□□□□□ -1.38
Ddx55Q6ZPL9 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms