Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
Msx2Q03358 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.07□□□□□ -1.44
Msx2Q03358 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm14307-201ENSMUST00000118930 291 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm15349-201ENSMUST00000121154 204 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm13162-201ENSMUST00000121481 454 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm24628-201ENSMUST00000122761 289 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm14297-201ENSMUST00000129110 291 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm16274-201ENSMUST00000139251 592 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm16138-201ENSMUST00000159341 821 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm28006-201ENSMUST00000183841 122 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm27522-201ENSMUST00000183949 230 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm6717-201ENSMUST00000185549 838 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm28700-201ENSMUST00000187614 579 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm29281-201ENSMUST00000188077 381 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm18849-201ENSMUST00000189861 560 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm18900-201ENSMUST00000193218 584 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Trbv24-201ENSMUST00000194614 347 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm36953-201ENSMUST00000195295 268 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm17824-201ENSMUST00000197690 805 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm44910-201ENSMUST00000208451 396 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm9685-201ENSMUST00000211275 538 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm6885-201ENSMUST00000217261 372 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm4057-201ENSMUST00000221407 368 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Msx2Q03358 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm6166-201ENSMUST00000098689 409 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Msx2Q03358 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Msx2Q03358 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm19074-201ENSMUST00000218915 1429 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.07□□□□□ -1.44
Msx2Q03358 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msx2Q03358 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.06□□□□□ -1.44
Msx2Q03358 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msx2Q03358 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.06□□□□□ -1.44
Msx2Q03358 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Msx2Q03358 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Gm23942-201ENSMUST00000101956 107 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Gm26384-201ENSMUST00000102183 110 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Gm23834-201ENSMUST00000104436 129 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Msx2Q03358 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Msx2Q03358 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Mir467g-201ENSMUST00000116906 120 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Gm8757-201ENSMUST00000119660 372 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Gm11533-201ENSMUST00000120287 477 ntBASIC6.06□□□□□ -1.44
Msx2Q03358 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms