Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm19029-201ENSMUST00000189923 564 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm17775-201ENSMUST00000198542 258 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm18537-201ENSMUST00000205709 989 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm18127-201ENSMUST00000208479 725 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm17766-201ENSMUST00000209223 442 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 AC154283.1-201ENSMUST00000228417 389 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Mir546-201ENSMUST00000102105 121 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm11912-201ENSMUST00000117235 264 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm25293-201ENSMUST00000122792 285 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm23513-201ENSMUST00000158181 133 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm6872-201ENSMUST00000165001 700 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm7316-201ENSMUST00000165395 445 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm25534-201ENSMUST00000175365 125 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm20674-201ENSMUST00000177452 369 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm26925-201ENSMUST00000182470 957 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm45870-201ENSMUST00000211269 601 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm5457-201ENSMUST00000022260 333 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC173482.3-201ENSMUST00000225492 1212 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.6□□□□□ -1.67
Nkx3-1P97436 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nkx3-1P97436 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nkx3-1P97436 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Nkx3-1P97436 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms