Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 AC120375.1-201ENSMUST00000227034 3612 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm11833-201ENSMUST00000118393 853 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm26219-201ENSMUST00000175216 71 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm44485-201ENSMUST00000199569 137 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm44754-201ENSMUST00000208155 400 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 AC161252.2-201ENSMUST00000224978 374 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PrkdcP97313 AC126439.1-201ENSMUST00000226772 2104 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm4541-201ENSMUST00000208901 1848 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm14750-201ENSMUST00000118262 516 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm15772-201ENSMUST00000118533 438 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm11790-201ENSMUST00000119569 455 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm44984-201ENSMUST00000207802 394 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PrkdcP97313 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 AC163032.1-201ENSMUST00000220671 2970 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm43099-201ENSMUST00000198943 5241 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm11485-201ENSMUST00000120048 1175 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Mir5134-201ENSMUST00000175529 78 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm45857-201ENSMUST00000212207 356 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PrkdcP97313 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm43766-201ENSMUST00000200590 5417 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm44567-201ENSMUST00000205645 2631 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm12231-201ENSMUST00000119447 695 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm23860-201ENSMUST00000179446 132 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm8941-201ENSMUST00000181451 899 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm27883-201ENSMUST00000183941 102 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.45□□□□□ -1.86
PrkdcP97313 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PrkdcP97313 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm37846-201ENSMUST00000191840 3774 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
PrkdcP97313 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PrkdcP97313 Gm43891-201ENSMUST00000205132 3112 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm42892-201ENSMUST00000196227 3973 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Gm37593-201ENSMUST00000191669 3254 ntBASIC3.45□□□□□ -1.86
PrkdcP97313 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PrkdcP97313 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms