Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Nub1P54729 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Nub1P54729 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.93□□□□□ -1.3
Nub1P54729 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.93□□□□□ -1.3
Nub1P54729 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.93□□□□□ -1.3
Nub1P54729 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm14365-201ENSMUST00000117535 587 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm5793-201ENSMUST00000119393 630 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm12041-201ENSMUST00000121606 602 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm23883-201ENSMUST00000122686 290 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm11545-201ENSMUST00000146507 375 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm12504-202ENSMUST00000148026 306 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm2619-202ENSMUST00000166777 651 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm18833-201ENSMUST00000173218 862 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Mir5128-201ENSMUST00000175217 84 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm23632-201ENSMUST00000175289 125 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm22642-201ENSMUST00000175352 252 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm8676-201ENSMUST00000184206 637 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm5050-201ENSMUST00000197164 775 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.93□□□□□ -1.3
Nub1P54729 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm21041-201ENSMUST00000214829 823 ntBASIC6.93□□□□□ -1.3
Nub1P54729 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.93□□□□□ -1.3
Nub1P54729 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm6436-201ENSMUST00000077163 451 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm28392-201ENSMUST00000077630 393 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm23238-201ENSMUST00000083007 164 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Gm10205-201ENSMUST00000087431 234 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.93□□□□□ -1.3
Nub1P54729 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Nub1P54729 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.93□□□□□ -1.3
Nub1P54729 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Nub1P54729 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.93□□□□□ -1.3
Nub1P54729 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Nub1P54729 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Nub1P54729 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nub1P54729 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Mir678-201ENSMUST00000102114 84 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Mir804-201ENSMUST00000103251 95 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm23768-201ENSMUST00000104440 131 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nub1P54729 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Nub1P54729 Gm16394-201ENSMUST00000117289 675 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm7834-201ENSMUST00000117560 437 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm14116-201ENSMUST00000117733 805 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm14794-201ENSMUST00000118181 192 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm11920-201ENSMUST00000118491 563 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm13579-201ENSMUST00000118519 517 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm11445-201ENSMUST00000119101 532 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm12067-201ENSMUST00000119755 1148 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm13865-201ENSMUST00000120957 865 ntBASIC6.92□□□□□ -1.3
Nub1P54729 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.92□□□□□ -1.3
Nub1P54729 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Nub1P54729 Gm20549-201ENSMUST00000174804 429 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms