Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm27037-201ENSMUST00000182270 960 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.05□□□□□ -1.6
Cdx2P43241 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm20586-201ENSMUST00000210122 547 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm23686-201ENSMUST00000083241 164 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Cdx2P43241 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.04□□□□□ -1.6
Cdx2P43241 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Cdx2P43241 Mir92b-201ENSMUST00000102300 83 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm25096-201ENSMUST00000104043 129 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm22020-201ENSMUST00000104358 136 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm14046-201ENSMUST00000119389 509 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm23993-201ENSMUST00000157478 144 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm3531-201ENSMUST00000162698 489 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Mir5128-201ENSMUST00000175217 84 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx2P43241 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm28769-201ENSMUST00000190176 615 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.04□□□□□ -1.6
Cdx2P43241 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm45870-201ENSMUST00000211269 601 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm22826-201ENSMUST00000083774 165 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.04□□□□□ -1.6
Cdx2P43241 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx2P43241 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx2P43241 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Cdx2P43241 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdx2P43241 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdx2P43241 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdx2P43241 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdx2P43241 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdx2P43241 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdx2P43241 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdx2P43241 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Cdx2P43241 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cdx2P43241 Gm24469-201ENSMUST00000104487 131 ntBASIC5.03□□□□□ -1.6
Cdx2P43241 Gm8430-201ENSMUST00000119780 471 ntBASIC5.03□□□□□ -1.6
Cdx2P43241 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.03□□□□□ -1.6
Cdx2P43241 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdx2P43241 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms