Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm7045-201ENSMUST00000221466 605 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 AC147639.1-201ENSMUST00000224216 661 ntBASIC7.36□□□□□ -1.23
Col18a1P39061 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col18a1P39061 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col18a1P39061 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm11410-201ENSMUST00000120053 1143 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.35□□□□□ -1.23
Col18a1P39061 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm21816-201ENSMUST00000179255 360 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm28116-201ENSMUST00000189064 387 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm38040-201ENSMUST00000193505 225 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm37908-201ENSMUST00000195828 470 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm8458-201ENSMUST00000196658 819 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 BX530055.1-201ENSMUST00000197285 122 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Trav15d-3-201ENSMUST00000198604 167 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm44243-201ENSMUST00000204323 692 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Gm44961-201ENSMUST00000207450 196 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm6104-201ENSMUST00000078030 603 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col18a1P39061 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Col18a1P39061 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col18a1P39061 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col18a1P39061 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.35□□□□□ -1.23
Col18a1P39061 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col18a1P39061 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col18a1P39061 Gm23429-201ENSMUST00000122486 149 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC7.34□□□□□ -1.23
Col18a1P39061 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Col18a1P39061 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Gm44865-201ENSMUST00000207240 531 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 CT009765.2-201ENSMUST00000221331 392 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Nsa2-203ENSMUST00000225410 974 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.34□□□□□ -1.23
Col18a1P39061 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Col18a1P39061 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col18a1P39061 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Col18a1P39061 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col18a1P39061 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.34□□□□□ -1.23
Col18a1P39061 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Col18a1P39061 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col18a1P39061 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm6429-201ENSMUST00000117144 475 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm13454-201ENSMUST00000118166 483 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm15385-201ENSMUST00000118725 667 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col18a1P39061 Gm26034-201ENSMUST00000158154 116 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm17061-201ENSMUST00000163167 499 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.33□□□□□ -1.24
Col18a1P39061 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.33□□□□□ -1.24
Col18a1P39061 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col18a1P39061 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC7.33□□□□□ -1.24
Col18a1P39061 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col18a1P39061 Gm8676-201ENSMUST00000184206 637 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm27387-201ENSMUST00000184583 116 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.33□□□□□ -1.24
Col18a1P39061 Gm37670-201ENSMUST00000193622 229 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.33□□□□□ -1.24
Col18a1P39061 Gm43895-201ENSMUST00000203219 855 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms