Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm16456-201ENSMUST00000174431 920 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm20056-201ENSMUST00000194813 519 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm44259-201ENSMUST00000204996 298 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Col2a1P28481 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm7822-201ENSMUST00000222433 581 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Snora30-201ENSMUST00000083325 130 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col2a1P28481 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Col2a1P28481 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.9□□□□□ -1.46
Col2a1P28481 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Col2a1P28481 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm14985-201ENSMUST00000118693 786 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm6047-201ENSMUST00000167221 574 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm21850-201ENSMUST00000179792 359 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.9□□□□□ -1.47
Col2a1P28481 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm28769-201ENSMUST00000190176 615 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm9442-201ENSMUST00000194242 319 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm42452-201ENSMUST00000199749 617 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.9□□□□□ -1.47
Col2a1P28481 Gm43418-201ENSMUST00000201334 428 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Gm44952-201ENSMUST00000204443 433 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.9□□□□□ -1.47
Col2a1P28481 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col2a1P28481 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col2a1P28481 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col2a1P28481 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Col2a1P28481 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm22899-201ENSMUST00000104540 131 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm23879-201ENSMUST00000116874 126 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Gm14485-201ENSMUST00000119489 493 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Gm13213-201ENSMUST00000119668 474 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Gm6620-201ENSMUST00000120113 715 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm27492-201ENSMUST00000185194 187 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Gm38011-201ENSMUST00000193312 279 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Col2a1P28481 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col2a1P28481 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.89□□□□□ -1.47
Col2a1P28481 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col2a1P28481 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Col2a1P28481 Gm17137-201ENSMUST00000164106 4371 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col2a1P28481 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col2a1P28481 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.88□□□□□ -1.47
Col2a1P28481 Gm11822-201ENSMUST00000119177 415 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Gm23837-201ENSMUST00000122656 286 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col2a1P28481 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.88□□□□□ -1.47
Col2a1P28481 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.88□□□□□ -1.47
Col2a1P28481 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms