Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm23456-201ENSMUST00000083335 137 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm26163-201ENSMUST00000083792 178 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm25515-201ENSMUST00000083858 157 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cdx1P18111 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm37092-201ENSMUST00000193381 1518 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.44□□□□□ -1.7
Cdx1P18111 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Cdx1P18111 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdx1P18111 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm22372-201ENSMUST00000104589 136 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm6893-201ENSMUST00000118385 522 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm13013-201ENSMUST00000119087 523 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm12850-201ENSMUST00000119210 436 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm16074-201ENSMUST00000119524 444 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm12768-201ENSMUST00000120055 759 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm15331-201ENSMUST00000120225 385 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm14331-201ENSMUST00000120396 409 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm13998-201ENSMUST00000120952 335 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm25806-201ENSMUST00000122782 122 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm23050-201ENSMUST00000158775 165 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm25445-201ENSMUST00000158996 299 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm16164-201ENSMUST00000160078 468 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm2959-201ENSMUST00000169844 621 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm18199-201ENSMUST00000173820 835 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Mir3572-201ENSMUST00000175549 86 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm26057-201ENSMUST00000178099 165 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm29610-201ENSMUST00000187749 453 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm37187-201ENSMUST00000193425 341 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm43215-201ENSMUST00000199108 252 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm4742-201ENSMUST00000200261 771 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm42643-201ENSMUST00000200504 279 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm5990-201ENSMUST00000203126 746 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm46223-201ENSMUST00000215196 675 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm18409-202ENSMUST00000220105 529 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdx1P18111 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx1P18111 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx1P18111 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.43□□□□□ -1.7
Cdx1P18111 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx1P18111 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Cdx1P18111 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Cdx1P18111 Mir676-201ENSMUST00000102443 89 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.42□□□□□ -1.7
Cdx1P18111 Gm13493-201ENSMUST00000120318 493 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms