Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm10048-201ENSMUST00000194196 372 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm5842-201ENSMUST00000195073 622 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC6.09□□□□□ -1.43
Col1a1P11087 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Col1a1P11087 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Col1a1P11087 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.09□□□□□ -1.43
Col1a1P11087 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.09□□□□□ -1.43
Col1a1P11087 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col1a1P11087 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col1a1P11087 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col1a1P11087 Gm8202-201ENSMUST00000117682 310 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Gm12190-201ENSMUST00000120001 187 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Col1a1P11087 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC6.09□□□□□ -1.44
Col1a1P11087 Gm24113-201ENSMUST00000157477 276 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Gm22789-201ENSMUST00000157884 130 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Gm23023-201ENSMUST00000158767 109 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Gm21735-201ENSMUST00000190360 696 ntBASIC6.09□□□□□ -1.44
Col1a1P11087 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.09□□□□□ -1.44
Col1a1P11087 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col1a1P11087 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col1a1P11087 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC6.09□□□□□ -1.44
Col1a1P11087 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Col1a1P11087 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.09□□□□□ -1.44
Col1a1P11087 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col1a1P11087 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.08□□□□□ -1.44
Col1a1P11087 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col1a1P11087 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col1a1P11087 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.08□□□□□ -1.44
Col1a1P11087 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm42528-201ENSMUST00000200697 3418 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm23294-201ENSMUST00000104150 164 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm25419-201ENSMUST00000104215 191 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm24235-201ENSMUST00000104319 129 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm15828-201ENSMUST00000119911 522 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm25427-201ENSMUST00000157605 103 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm16114-201ENSMUST00000161930 300 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm6647-201ENSMUST00000170514 641 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm27528-201ENSMUST00000183544 205 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Mir6416-201ENSMUST00000183664 117 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm29086-201ENSMUST00000186774 222 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm29085-201ENSMUST00000187108 225 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm37581-201ENSMUST00000192371 988 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col1a1P11087 AC133910.1-201ENSMUST00000228128 624 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Gm5045-201ENSMUST00000027054 810 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm25260-201ENSMUST00000083053 134 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col1a1P11087 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.08□□□□□ -1.44
Col1a1P11087 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col1a1P11087 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col1a1P11087 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col1a1P11087 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col1a1P11087 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Gm11196-201ENSMUST00000119052 395 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.07□□□□□ -1.44
Col1a1P11087 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col1a1P11087 Mir1957b-201ENSMUST00000184608 123 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Mir6933-201ENSMUST00000184982 81 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm8599-201ENSMUST00000193033 457 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm6366-201ENSMUST00000198766 826 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 Gm45236-201ENSMUST00000208632 229 ntBASIC6.07□□□□□ -1.44
Col1a1P11087 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms