Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxd3P09027 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm23578-201ENSMUST00000103943 104 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm25631-201ENSMUST00000104390 130 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm26016-201ENSMUST00000104403 129 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm14756-201ENSMUST00000116395 240 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm10241-201ENSMUST00000117664 286 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm11577-201ENSMUST00000118030 737 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm13222-201ENSMUST00000119638 138 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm11726-201ENSMUST00000121028 424 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm2020-201ENSMUST00000145242 579 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm25334-201ENSMUST00000158036 110 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm17538-201ENSMUST00000168236 327 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.69□□□□□ -1.5
Hoxd3P09027 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm18848-201ENSMUST00000182069 792 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Pea15b-201ENSMUST00000182806 387 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm9556-201ENSMUST00000182938 940 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm27218-201ENSMUST00000183745 392 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm2719-201ENSMUST00000191929 444 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm43142-201ENSMUST00000198670 361 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm42475-201ENSMUST00000201212 295 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm44125-201ENSMUST00000203068 448 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm45049-201ENSMUST00000207586 591 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm18194-201ENSMUST00000210455 481 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.69□□□□□ -1.5
Hoxd3P09027 AV026068-229ENSMUST00000225516 595 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm23515-201ENSMUST00000082829 107 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm22504-201ENSMUST00000082963 139 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm10222-201ENSMUST00000088336 294 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Mir455-201ENSMUST00000093594 82 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm43429-201ENSMUST00000197889 2251 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm5903-201ENSMUST00000121836 2325 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Klf5-202ENSMUST00000226784 2852 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxd3P09027 Gm37535-201ENSMUST00000194442 2365 ntBASIC5.69□□□□□ -1.5
Hoxd3P09027 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxd3P09027 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.68□□□□□ -1.5
Hoxd3P09027 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms