Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.54□□□□□ -1.52
TnfP06804 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.54□□□□□ -1.52
TnfP06804 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.54□□□□□ -1.52
TnfP06804 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.54□□□□□ -1.52
TnfP06804 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.54□□□□□ -1.52
TnfP06804 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.54□□□□□ -1.52
TnfP06804 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 Snord15b-201ENSMUST00000083032 145 ntBASIC5.54□□□□□ -1.52
TnfP06804 Mir412-201ENSMUST00000083636 80 ntBASIC5.54□□□□□ -1.52
TnfP06804 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TnfP06804 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.54□□□□□ -1.52
TnfP06804 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.54□□□□□ -1.52
TnfP06804 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.54□□□□□ -1.52
TnfP06804 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TnfP06804 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.54□□□□□ -1.52
TnfP06804 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TnfP06804 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.54□□□□□ -1.52
TnfP06804 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
TnfP06804 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.54□□□□□ -1.52
TnfP06804 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.53□□□□□ -1.52
TnfP06804 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
TnfP06804 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TnfP06804 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.53□□□□□ -1.52
TnfP06804 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.53□□□□□ -1.52
TnfP06804 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TnfP06804 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.53□□□□□ -1.52
TnfP06804 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Gm14046-201ENSMUST00000119389 509 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.53□□□□□ -1.52
TnfP06804 Gm26350-201ENSMUST00000157531 288 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm23700-201ENSMUST00000158842 102 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.53□□□□□ -1.52
TnfP06804 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Gm37581-201ENSMUST00000192371 988 ntBASIC5.53□□□□□ -1.52
TnfP06804 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm43084-201ENSMUST00000200696 947 ntBASIC5.53□□□□□ -1.52
TnfP06804 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.53□□□□□ -1.52
TnfP06804 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.53□□□□□ -1.52
TnfP06804 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.53□□□□□ -1.52
TnfP06804 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TnfP06804 Gm18127-201ENSMUST00000208479 725 ntBASIC5.53□□□□□ -1.52
TnfP06804 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Gm2645-201ENSMUST00000223516 547 ntBASIC5.53□□□□□ -1.52
TnfP06804 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.53□□□□□ -1.52
TnfP06804 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.53□□□□□ -1.52
TnfP06804 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TnfP06804 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.53□□□□□ -1.52
TnfP06804 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TnfP06804 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TnfP06804 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.53□□□□□ -1.52
TnfP06804 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TnfP06804 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TnfP06804 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
TnfP06804 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.52□□□□□ -1.53
TnfP06804 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TnfP06804 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.52□□□□□ -1.53
TnfP06804 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
TnfP06804 Gm15971-201ENSMUST00000119372 211 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm14125-202ENSMUST00000120921 756 ntBASIC5.52□□□□□ -1.53
TnfP06804 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.52□□□□□ -1.53
TnfP06804 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.52□□□□□ -1.53
TnfP06804 Gm25116-201ENSMUST00000157191 122 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm25603-201ENSMUST00000158361 105 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm17086-201ENSMUST00000171346 484 ntBASIC5.52□□□□□ -1.53
TnfP06804 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.52□□□□□ -1.53
TnfP06804 Mir3062-201ENSMUST00000174986 105 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm26731-201ENSMUST00000180683 543 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.52□□□□□ -1.53
TnfP06804 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.52□□□□□ -1.53
TnfP06804 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.52□□□□□ -1.53
TnfP06804 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.52□□□□□ -1.53
TnfP06804 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.52□□□□□ -1.53
TnfP06804 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TnfP06804 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TnfP06804 Mir20a-201ENSMUST00000083508 107 ntBASIC5.52□□□□□ -1.53
TnfP06804 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TnfP06804 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TnfP06804 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TnfP06804 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms