Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm18150-201ENSMUST00000195341 645 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Gm32453-201ENSMUST00000204183 456 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 AC241593.2-201ENSMUST00000225099 510 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Gm11251-201ENSMUST00000119593 2800 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Gm11290-204ENSMUST00000224688 3042 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Malat1-201ENSMUST00000172812 6983 ntBASIC9.53□□□□□ -0.88
Ccdc180J3QNE4 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Ccdc180J3QNE4 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Ccdc180J3QNE4 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccdc180J3QNE4 Gm11790-201ENSMUST00000119569 455 ntBASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Gm45032-201ENSMUST00000205375 520 ntBASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 AC158955.1-201ENSMUST00000227140 385 ntBASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccdc180J3QNE4 Gm13491-201ENSMUST00000118267 235 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Zfp389-201ENSMUST00000118425 675 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm17014-201ENSMUST00000120765 168 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm13149-201ENSMUST00000122071 339 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm28503-201ENSMUST00000185966 147 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm42643-201ENSMUST00000200504 279 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm18255-201ENSMUST00000211316 765 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 AC137117.1-201ENSMUST00000226912 441 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm44739-201ENSMUST00000205294 1426 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm16523-202ENSMUST00000203640 4750 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm37023-201ENSMUST00000192895 2426 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm37370-201ENSMUST00000191996 1410 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm22657-201ENSMUST00000104197 132 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm15786-201ENSMUST00000121079 450 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm26350-201ENSMUST00000157531 288 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm5777-201ENSMUST00000177265 448 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 AC121986.1-201ENSMUST00000218588 781 ntBASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Ccdc180J3QNE4 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 AC154623.1-201ENSMUST00000224348 805 ntBASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ccdc180J3QNE4 Gm15297-201ENSMUST00000117795 290 ntBASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Gm29332-201ENSMUST00000190829 227 ntBASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Gm2623-201ENSMUST00000199229 286 ntBASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Gm7045-201ENSMUST00000221466 605 ntBASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ccdc180J3QNE4 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms