Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm23981-201ENSMUST00000157136 106 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm23228-201ENSMUST00000157296 270 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm25395-201ENSMUST00000157343 272 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm25553-201ENSMUST00000158076 79 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm26037-201ENSMUST00000158150 311 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm24545-201ENSMUST00000158651 85 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm18604-201ENSMUST00000172535 558 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm27295-201ENSMUST00000184264 153 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm29496-201ENSMUST00000189854 693 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm37193-201ENSMUST00000193087 513 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm37404-201ENSMUST00000195726 359 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm43238-201ENSMUST00000196463 359 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm5324-201ENSMUST00000208115 476 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm32983-201ENSMUST00000208500 505 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm18789-201ENSMUST00000216115 550 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm46311-201ENSMUST00000217971 203 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm3785-201ENSMUST00000221000 202 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm9237-201ENSMUST00000221499 548 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm9985-201ENSMUST00000044101 510 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm7204-201ENSMUST00000062591 600 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm45201-201ENSMUST00000207187 2679 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Mir466n-201ENSMUST00000104798 94 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm11501-201ENSMUST00000118039 581 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm6987-201ENSMUST00000119319 428 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm2318-201ENSMUST00000119623 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm23754-201ENSMUST00000157576 63 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7316-201ENSMUST00000165395 445 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7438-201ENSMUST00000177664 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7408-201ENSMUST00000178014 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7386-201ENSMUST00000178020 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm3657-201ENSMUST00000178170 639 ntBASIC5.66□□□□□ -1.5
Pcdh1F7BJK1 Gm7415-201ENSMUST00000178205 639 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms