Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm29036-201ENSMUST00000189967 877 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm8458-201ENSMUST00000196658 819 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Robo2-210ENSMUST00000226478 8059 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm15390-201ENSMUST00000120323 738 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm9442-201ENSMUST00000194242 319 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm45070-201ENSMUST00000208100 246 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm22493-201ENSMUST00000104494 132 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm15905-201ENSMUST00000137042 298 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm23906-201ENSMUST00000157573 128 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Mir6960-201ENSMUST00000183449 61 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm5244-202ENSMUST00000189517 743 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm8599-201ENSMUST00000193033 457 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm9134-201ENSMUST00000193186 551 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm17951-201ENSMUST00000198536 496 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm6366-201ENSMUST00000198766 826 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm18601-201ENSMUST00000220831 634 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.36□□□□□ -1.55
Col4a6B1AVK5 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm8145-201ENSMUST00000118220 745 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm12237-201ENSMUST00000120158 470 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm22804-201ENSMUST00000158052 101 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm23354-201ENSMUST00000158426 104 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms