Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.38□□□□□ -1.71
Col6a4A2AX52 Gm23501-201ENSMUST00000157744 256 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 Mir7074-201ENSMUST00000183884 63 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col6a4A2AX52 Gm23686-201ENSMUST00000083241 164 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col6a4A2AX52 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col6a4A2AX52 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Col6a4A2AX52 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.38□□□□□ -1.71
Col6a4A2AX52 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm43180-201ENSMUST00000197541 2886 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm22493-201ENSMUST00000104494 132 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm14172-201ENSMUST00000118255 644 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm27492-201ENSMUST00000185194 187 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm42998-201ENSMUST00000197053 2371 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col6a4A2AX52 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm5777-201ENSMUST00000177265 448 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm21856-201ENSMUST00000187547 696 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm8458-201ENSMUST00000196658 819 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm44307-201ENSMUST00000204466 764 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 AC131033.2-201ENSMUST00000228138 1011 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Gm37914-201ENSMUST00000195317 2679 ntBASIC4.37□□□□□ -1.71
Col6a4A2AX52 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm6382-201ENSMUST00000118873 942 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm43309-201ENSMUST00000200837 458 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm43360-201ENSMUST00000197656 2887 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm42781-201ENSMUST00000201317 2719 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.36□□□□□ -1.71
Col6a4A2AX52 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.36□□□□□ -1.71
Col6a4A2AX52 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm25096-201ENSMUST00000104043 129 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm8202-201ENSMUST00000117682 310 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm5942-201ENSMUST00000120046 439 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm18128-201ENSMUST00000172625 511 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Mir7222-201ENSMUST00000183740 75 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm27760-201ENSMUST00000185048 114 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm23925-202ENSMUST00000188429 132 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm43136-201ENSMUST00000200403 636 ntBASIC4.35□□□□□ -1.71
Col6a4A2AX52 Gm43418-201ENSMUST00000201334 428 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms