Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.75□□□□□ -1.49
Scn3aA2ASI5 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm22220-201ENSMUST00000082671 149 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm27492-201ENSMUST00000185194 187 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm6719-201ENSMUST00000202067 335 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Gm5374-202ENSMUST00000222910 314 ntBASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn3aA2ASI5 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm27820-201ENSMUST00000183628 175 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm8480-201ENSMUST00000190350 698 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm43136-201ENSMUST00000200403 636 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm34224-201ENSMUST00000204606 364 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm8999-201ENSMUST00000204951 969 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.73□□□□□ -1.49
Scn3aA2ASI5 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scn3aA2ASI5 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm15480-201ENSMUST00000120442 519 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm7840-201ENSMUST00000122086 533 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Mir6416-201ENSMUST00000183664 117 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm19617-201ENSMUST00000202977 308 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm19936-201ENSMUST00000216414 838 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn3aA2ASI5 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.72□□□□□ -1.49
Scn3aA2ASI5 Gm23879-201ENSMUST00000116874 126 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms