Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ube3bQ9ES34 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm14909-201ENSMUST00000117853 351 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm15025-201ENSMUST00000118434 418 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm11813-201ENSMUST00000118586 291 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm11484-201ENSMUST00000119808 338 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm12155-201ENSMUST00000121267 160 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm15075-201ENSMUST00000122187 477 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm26455-201ENSMUST00000175300 92 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Mir3473f-201ENSMUST00000183743 136 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm28996-201ENSMUST00000190316 721 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Trbv8-201ENSMUST00000194020 285 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm44374-201ENSMUST00000199821 140 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm5322-201ENSMUST00000206142 699 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC168062.2-201ENSMUST00000228907 422 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ube3bQ9ES34 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.92□□□□□ -1.14
Ube3bQ9ES34 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm13455-201ENSMUST00000118767 517 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm15181-201ENSMUST00000120142 177 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm23674-201ENSMUST00000157473 131 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm25898-201ENSMUST00000158303 106 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm22361-201ENSMUST00000158435 176 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm26381-201ENSMUST00000174895 92 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm22252-201ENSMUST00000179316 79 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Trbv12-3-201ENSMUST00000192675 372 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm44361-201ENSMUST00000197960 94 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm44959-201ENSMUST00000209127 231 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm18258-201ENSMUST00000210413 542 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC122905.2-201ENSMUST00000220325 269 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC140930.4-201ENSMUST00000220750 150 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC164424.1-201ENSMUST00000221690 170 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 AC144798.1-201ENSMUST00000228120 391 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm6436-201ENSMUST00000077163 451 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ube3bQ9ES34 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms