Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm29335-201ENSMUST00000188361 459 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm28956-201ENSMUST00000189047 427 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm20954-201ENSMUST00000189078 644 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm43224-201ENSMUST00000201567 898 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm34149-201ENSMUST00000203547 304 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm44023-201ENSMUST00000203710 469 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm5917-201ENSMUST00000217638 721 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm3089-201ENSMUST00000200804 1395 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm3302-201ENSMUST00000201462 1395 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm16436-201ENSMUST00000121510 1607 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm14197-201ENSMUST00000117480 1049 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm14293-201ENSMUST00000118528 577 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm11617-201ENSMUST00000119609 639 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm13357-201ENSMUST00000120528 537 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm26993-201ENSMUST00000182766 789 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm29634-201ENSMUST00000188467 696 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm28699-201ENSMUST00000189193 696 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm6828-201ENSMUST00000207902 1186 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm18225-201ENSMUST00000216708 742 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm18940-201ENSMUST00000222518 871 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 AC154436.2-201ENSMUST00000227408 208 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim11Q99PQ2 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms