Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Gm14445-201ENSMUST00000117051 1484 ntBASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim8Q99PJ2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm16421-201ENSMUST00000117616 1557 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm23987-201ENSMUST00000117039 129 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm12565-201ENSMUST00000119004 649 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm5793-201ENSMUST00000119393 630 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm12451-201ENSMUST00000121636 633 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm11609-201ENSMUST00000121926 793 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm26354-201ENSMUST00000158221 129 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm26352-201ENSMUST00000158223 125 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm22158-201ENSMUST00000158411 126 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm3123-201ENSMUST00000163480 480 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm6541-201ENSMUST00000165542 561 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm27985-201ENSMUST00000185112 378 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm29551-201ENSMUST00000190913 698 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm42164-201ENSMUST00000198881 379 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm9535-201ENSMUST00000218499 768 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim8Q99PJ2 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm25313-201ENSMUST00000101817 116 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm12369-201ENSMUST00000121343 942 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm13642-201ENSMUST00000121697 381 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm15696-201ENSMUST00000121730 445 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms