Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27849-201ENSMUST00000183673 125 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm7870-201ENSMUST00000184467 616 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm43007-201ENSMUST00000197618 291 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm43945-201ENSMUST00000203595 754 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 AC153971.2-201ENSMUST00000214553 777 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm7570-201ENSMUST00000215246 698 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm8125-201ENSMUST00000216602 738 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 mt-Tr-201ENSMUST00000082412 68 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 AC167192.3-201ENSMUST00000224096 1567 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Gm43201-201ENSMUST00000195925 3416 ntBASIC6.94□□□□□ -1.3
Clp1Q99LI9 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.94□□□□□ -1.3
Clp1Q99LI9 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm14529-201ENSMUST00000117894 406 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm6893-201ENSMUST00000118385 522 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm14534-201ENSMUST00000120045 357 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm6587-201ENSMUST00000120219 613 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm13162-201ENSMUST00000121481 454 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm15959-201ENSMUST00000121724 368 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm22755-201ENSMUST00000157143 100 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm23164-201ENSMUST00000175084 111 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Mir5128-201ENSMUST00000175217 84 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm7438-201ENSMUST00000177664 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm7408-201ENSMUST00000178014 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm7386-201ENSMUST00000178020 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm3657-201ENSMUST00000178170 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm7415-201ENSMUST00000178205 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm6223-201ENSMUST00000178436 871 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm7391-201ENSMUST00000178680 639 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm26925-201ENSMUST00000182470 957 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm18802-201ENSMUST00000186270 888 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm19457-201ENSMUST00000200995 448 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm4510-201ENSMUST00000218265 427 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Snora44-201ENSMUST00000082670 129 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm23097-201ENSMUST00000083448 105 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm26108-201ENSMUST00000083973 191 ntBASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clp1Q99LI9 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms