Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Mir466i-201ENSMUST00000116924 121 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm13321-201ENSMUST00000117101 400 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm11821-201ENSMUST00000117335 979 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm11893-201ENSMUST00000117829 491 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm15034-201ENSMUST00000120043 349 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm25430-201ENSMUST00000157614 289 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm22804-201ENSMUST00000158052 101 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Mir7046-201ENSMUST00000183435 66 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm27887-201ENSMUST00000184367 102 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm45249-201ENSMUST00000211021 348 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Nsa2-203ENSMUST00000225410 974 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lsm1Q8VC85 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm25422-201ENSMUST00000104219 129 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm23593-201ENSMUST00000104309 120 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm13681-201ENSMUST00000117925 210 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm27266-201ENSMUST00000184521 123 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm36998-201ENSMUST00000193205 704 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm43501-201ENSMUST00000202513 107 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm17988-201ENSMUST00000208796 535 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Gm23508-201ENSMUST00000083079 72 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lsm1Q8VC85 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm22266-201ENSMUST00000104011 138 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm16394-201ENSMUST00000117289 675 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm14957-201ENSMUST00000121069 817 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lsm1Q8VC85 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms