Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Brf1Q8CFK2 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm8569-201ENSMUST00000117630 647 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm14335-201ENSMUST00000119165 810 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm16026-202ENSMUST00000159695 772 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm7266-201ENSMUST00000187999 405 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm9480-201ENSMUST00000198038 616 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Mir6906-201ENSMUST00000198998 58 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm18541-201ENSMUST00000215935 538 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC153646.1-201ENSMUST00000223229 1279 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.63□□□□□ -1.35
Brf1Q8CFK2 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Brf1Q8CFK2 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm13681-201ENSMUST00000117925 210 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm13678-201ENSMUST00000118926 340 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm12267-201ENSMUST00000121609 761 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm25342-201ENSMUST00000157459 122 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm8941-201ENSMUST00000181451 899 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm44003-201ENSMUST00000203024 490 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm44134-202ENSMUST00000204777 545 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm45246-201ENSMUST00000210820 367 ntBASIC6.62□□□□□ -1.35
Brf1Q8CFK2 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms