Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm24265-201ENSMUST00000101833 141 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm13731-201ENSMUST00000117332 196 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm4910-201ENSMUST00000119605 366 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm16200-201ENSMUST00000120385 331 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm12096-201ENSMUST00000121149 829 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm24685-201ENSMUST00000157764 285 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm23224-201ENSMUST00000158122 271 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm3216-201ENSMUST00000166927 486 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm3141-201ENSMUST00000168726 499 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm22122-201ENSMUST00000175147 200 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm24407-201ENSMUST00000177864 141 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm27030-201ENSMUST00000182551 464 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm29492-201ENSMUST00000187124 457 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm28356-202ENSMUST00000187566 858 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm5268-201ENSMUST00000189212 940 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm28507-201ENSMUST00000189737 703 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm18541-201ENSMUST00000215935 538 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 AC132237.2-201ENSMUST00000221702 1209 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim9Q8C7M3 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm12303-201ENSMUST00000119506 673 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm15786-201ENSMUST00000121079 450 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm23211-201ENSMUST00000122717 308 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm17044-201ENSMUST00000168549 828 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm20689-201ENSMUST00000176033 279 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm27887-201ENSMUST00000184367 102 ntBASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim9Q8C7M3 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms