Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25419-201ENSMUST00000104215 191 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm12423-201ENSMUST00000118334 135 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm25861-201ENSMUST00000158251 109 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Mir7031-201ENSMUST00000183860 65 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm8480-201ENSMUST00000190350 698 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm8719-201ENSMUST00000203602 534 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm11360-201ENSMUST00000221898 262 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 AC161269.1-201ENSMUST00000228426 318 ntBASIC7.31□□□□□ -1.24
Usp47Q8BY87 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Gm9700-201ENSMUST00000193786 1617 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Mir92b-201ENSMUST00000102300 83 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm15120-201ENSMUST00000120602 301 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm11759-201ENSMUST00000121742 464 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm23837-201ENSMUST00000122656 286 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 n-R5s21-201ENSMUST00000122692 117 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Mir6416-201ENSMUST00000183664 117 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm37492-201ENSMUST00000191948 376 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm5842-201ENSMUST00000195073 622 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm32453-201ENSMUST00000204183 456 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Anxa13-202ENSMUST00000227274 1201 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Usp47Q8BY87 n-R5s170-201ENSMUST00000083726 113 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Usp47Q8BY87 Gm38190-201ENSMUST00000192350 4755 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Naip3-201ENSMUST00000118082 4208 ntBASIC7.3□□□□□ -1.24
Usp47Q8BY87 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm8202-201ENSMUST00000117682 310 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm15171-201ENSMUST00000122191 334 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm5353-201ENSMUST00000139800 793 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm20674-201ENSMUST00000177452 369 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm9134-201ENSMUST00000193186 551 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm20940-201ENSMUST00000197308 360 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm5457-201ENSMUST00000022260 333 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm37890-201ENSMUST00000195610 3992 ntBASIC7.29□□□□□ -1.24
Usp47Q8BY87 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.29□□□□□ -1.24
Usp47Q8BY87 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Zfp389-201ENSMUST00000118425 675 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Gm23534-201ENSMUST00000157539 97 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 Gm25907-201ENSMUST00000158486 125 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 Gm6047-201ENSMUST00000167221 574 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 Gm9442-201ENSMUST00000194242 319 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Gm8672-201ENSMUST00000221200 332 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 AC241593.2-201ENSMUST00000225099 510 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Olfr654-201ENSMUST00000098173 1155 ntBASIC7.28□□□□□ -1.24
Usp47Q8BY87 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Usp47Q8BY87 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms