Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm32453-201ENSMUST00000204183 456 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm42528-201ENSMUST00000200697 3418 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm8214-201ENSMUST00000172123 351 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Mir6963-201ENSMUST00000183535 71 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Mir7028-201ENSMUST00000185016 64 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm28769-201ENSMUST00000190176 615 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm29332-201ENSMUST00000190829 227 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm42663-201ENSMUST00000199883 351 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm18100-201ENSMUST00000200897 452 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm5750-201ENSMUST00000218711 801 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 CT030242.3-201ENSMUST00000221231 581 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm42559-201ENSMUST00000201811 3532 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm14831-201ENSMUST00000120253 409 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm13149-201ENSMUST00000122071 339 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm25271-201ENSMUST00000157273 290 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm19617-201ENSMUST00000202977 308 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm18537-201ENSMUST00000205709 989 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm45722-201ENSMUST00000213075 466 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm29785-201ENSMUST00000217033 383 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Nup98Q6PFD9 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm14756-201ENSMUST00000116395 240 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm22676-201ENSMUST00000116972 129 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm14560-201ENSMUST00000118672 375 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm38046-201ENSMUST00000192733 550 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm43350-201ENSMUST00000196382 711 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Gm24166-201ENSMUST00000082724 135 ntBASIC6.03□□□□□ -1.44
Nup98Q6PFD9 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms