Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trim41Q5NCC3 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 AC151984.1-201ENSMUST00000218261 2976 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm24855-201ENSMUST00000104848 97 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm15186-201ENSMUST00000119345 563 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm28883-201ENSMUST00000189256 369 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm44312-201ENSMUST00000203536 469 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm45523-201ENSMUST00000210712 799 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm3690-201ENSMUST00000211341 262 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm45739-201ENSMUST00000213094 388 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm18704-201ENSMUST00000219736 446 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Mir7-2-201ENSMUST00000083675 97 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 AU020206-202ENSMUST00000206358 3009 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm10826-201ENSMUST00000215366 3304 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Gm37783-201ENSMUST00000192025 1856 ntBASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim41Q5NCC3 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm36962-201ENSMUST00000192114 1761 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm38009-201ENSMUST00000194884 3341 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm15006-201ENSMUST00000121419 1122 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm14821-201ENSMUST00000121975 435 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm23674-201ENSMUST00000157473 131 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm27044-201ENSMUST00000183033 796 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Mir6963-201ENSMUST00000183535 71 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Mir6417-201ENSMUST00000183815 116 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm9320-201ENSMUST00000184151 473 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm18849-201ENSMUST00000189861 560 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm7270-201ENSMUST00000195818 1128 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm43370-201ENSMUST00000196437 284 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gm45228-201ENSMUST00000206585 352 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 AC192333.6-201ENSMUST00000224565 725 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 n-R5s86-201ENSMUST00000083215 119 ntBASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trim41Q5NCC3 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm43873-201ENSMUST00000204505 3938 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms