Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm8145-201ENSMUST00000118220 745 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm11699-201ENSMUST00000119016 401 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm3931-201ENSMUST00000119038 455 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm23673-201ENSMUST00000157474 298 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm32308-201ENSMUST00000203053 280 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Mir193a-201ENSMUST00000083461 66 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 n-R5s170-201ENSMUST00000083726 113 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Shank3Q4ACU6 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.46□□□□□ -1.37
Shank3Q4ACU6 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Gm26350-201ENSMUST00000157531 288 ntBASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Gm25907-201ENSMUST00000158486 125 ntBASIC6.46□□□□□ -1.38
Shank3Q4ACU6 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Gm19186-201ENSMUST00000219922 333 ntBASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Shank3Q4ACU6 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm14628-201ENSMUST00000117508 635 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm23906-201ENSMUST00000157573 128 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm20614-201ENSMUST00000177106 632 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm27568-201ENSMUST00000184220 99 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm9057-201ENSMUST00000198791 296 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm4602-201ENSMUST00000203198 308 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm8719-201ENSMUST00000203602 534 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm23928-201ENSMUST00000082469 145 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm10705-201ENSMUST00000098980 461 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.45□□□□□ -1.38
Shank3Q4ACU6 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms