Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm22005-201ENSMUST00000082795 141 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Olfr878-201ENSMUST00000086061 1065 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col17a1Q07563 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col17a1Q07563 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col17a1Q07563 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm12112-201ENSMUST00000117772 231 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm15796-201ENSMUST00000162135 204 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm28097-201ENSMUST00000187333 366 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm34701-202ENSMUST00000204685 360 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC8.35□□□□□ -1.07
Col17a1Q07563 AC116589.9-201ENSMUST00000221462 908 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm15500-201ENSMUST00000071523 894 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Gm24763-201ENSMUST00000083688 190 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC8.35□□□□□ -1.07
Col17a1Q07563 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 AC155167.2-201ENSMUST00000226127 1945 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 AC156163.1-201ENSMUST00000215598 3369 ntBASIC8.35□□□□□ -1.07
Col17a1Q07563 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col17a1Q07563 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm13338-201ENSMUST00000120235 361 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC8.34□□□□□ -1.07
Col17a1Q07563 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm23905-201ENSMUST00000157568 109 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm24241-201ENSMUST00000157787 145 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm26486-201ENSMUST00000158021 110 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col17a1Q07563 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm27492-201ENSMUST00000185194 187 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm29516-201ENSMUST00000190402 468 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm18181-201ENSMUST00000190670 736 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm18382-201ENSMUST00000194394 582 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm42438-201ENSMUST00000197832 974 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm9278-201ENSMUST00000205508 553 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm6362-201ENSMUST00000217686 836 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 AC158511.1-201ENSMUST00000223622 764 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.34□□□□□ -1.07
Col17a1Q07563 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC8.34□□□□□ -1.08
Col17a1Q07563 Gm10727-201ENSMUST00000197107 1602 ntBASIC8.34□□□□□ -1.08
Col17a1Q07563 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm12486-201ENSMUST00000120887 541 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm8641-201ENSMUST00000186995 826 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Vmn1r82-202ENSMUST00000191002 918 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm8823-201ENSMUST00000193158 433 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm43370-201ENSMUST00000196437 284 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms