Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Col8a1Q00780 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.47□□□□□ -1.53
Col8a1Q00780 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col8a1Q00780 Robo2-210ENSMUST00000226478 8059 ntBASIC5.46□□□□□ -1.53
Col8a1Q00780 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.46□□□□□ -1.53
Col8a1Q00780 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.46□□□□□ -1.53
Col8a1Q00780 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.46□□□□□ -1.53
Col8a1Q00780 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col8a1Q00780 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col8a1Q00780 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col8a1Q00780 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm24789-201ENSMUST00000104282 131 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm12193-201ENSMUST00000117250 379 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm6427-201ENSMUST00000118721 979 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm8317-201ENSMUST00000121261 471 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm12005-201ENSMUST00000121451 379 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm23867-201ENSMUST00000122649 274 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm23740-201ENSMUST00000157385 100 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm26086-201ENSMUST00000157902 263 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm25603-201ENSMUST00000158361 105 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm22261-201ENSMUST00000158691 324 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm17155-201ENSMUST00000165969 473 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm21729-201ENSMUST00000180058 664 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm21853-201ENSMUST00000180071 664 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm27024-201ENSMUST00000182561 755 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm28956-201ENSMUST00000189047 427 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm29495-201ENSMUST00000189319 664 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm43308-201ENSMUST00000197236 373 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm4574-201ENSMUST00000207804 542 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm3785-201ENSMUST00000221000 202 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 AC117202.2-201ENSMUST00000226491 1101 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm26107-201ENSMUST00000083972 107 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.46□□□□□ -1.54
Col8a1Q00780 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Col8a1Q00780 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col8a1Q00780 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm24230-201ENSMUST00000104313 129 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm22714-201ENSMUST00000116894 78 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms