Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Gm23508-201ENSMUST00000083079 72 ntBASIC4.63□□□□□ -1.67
Nkx3-1P97436 Mir342-201ENSMUST00000083502 99 ntBASIC4.63□□□□□ -1.67
Nkx3-1P97436 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.63□□□□□ -1.67
Nkx3-1P97436 CT009480.3-201ENSMUST00000224051 3032 ntBASIC4.63□□□□□ -1.67
Nkx3-1P97436 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Nkx3-1P97436 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.63□□□□□ -1.67
Nkx3-1P97436 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm24578-201ENSMUST00000103970 129 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm24170-201ENSMUST00000104124 133 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm27148-201ENSMUST00000185086 160 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Mir409-201ENSMUST00000198153 79 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm44604-201ENSMUST00000205475 496 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm45246-201ENSMUST00000210820 367 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm8137-201ENSMUST00000218997 463 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nkx3-1P97436 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.62□□□□□ -1.67
Nkx3-1P97436 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nkx3-1P97436 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm24350-201ENSMUST00000104163 133 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm11447-201ENSMUST00000118983 858 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm11909-201ENSMUST00000121424 759 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm16060-201ENSMUST00000153140 478 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Nkx3-1P97436 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.61□□□□□ -1.67
Nkx3-1P97436 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms