Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm45628-201ENSMUST00000210849 274 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.92□□□□□ -1.46
CiitaP79621 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm9386-201ENSMUST00000095195 381 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CiitaP79621 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CiitaP79621 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.92□□□□□ -1.46
CiitaP79621 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.91□□□□□ -1.46
CiitaP79621 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CiitaP79621 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.91□□□□□ -1.46
CiitaP79621 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm14876-201ENSMUST00000120795 327 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm11369-201ENSMUST00000120812 318 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm11805-201ENSMUST00000121238 600 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Gm37996-201ENSMUST00000191859 367 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Mir409-201ENSMUST00000198153 79 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CiitaP79621 Gm44412-201ENSMUST00000203018 294 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.91□□□□□ -1.46
CiitaP79621 Gm18215-201ENSMUST00000204429 798 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm19201-201ENSMUST00000210127 778 ntBASIC5.91□□□□□ -1.46
CiitaP79621 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.91□□□□□ -1.46
CiitaP79621 Gm19256-201ENSMUST00000218550 231 ntBASIC5.91□□□□□ -1.46
CiitaP79621 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.91□□□□□ -1.46
CiitaP79621 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CiitaP79621 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.91□□□□□ -1.46
CiitaP79621 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CiitaP79621 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.91□□□□□ -1.46
CiitaP79621 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CiitaP79621 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CiitaP79621 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm11975-201ENSMUST00000118772 481 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm11447-201ENSMUST00000118983 858 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm3931-201ENSMUST00000119038 455 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm25176-201ENSMUST00000122640 125 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm25669-201ENSMUST00000157699 112 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm24363-201ENSMUST00000158440 311 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Gm3307-201ENSMUST00000176164 632 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm5946-201ENSMUST00000182340 970 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm42437-201ENSMUST00000197263 923 ntBASIC5.9□□□□□ -1.46
CiitaP79621 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.9□□□□□ -1.46
CiitaP79621 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.9□□□□□ -1.46
CiitaP79621 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms