Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm2878-201ENSMUST00000170173 486 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm18604-201ENSMUST00000172535 558 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm37784-201ENSMUST00000193233 189 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.57□□□□□ -1.36
Hmgb1P63158 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm9173-201ENSMUST00000198054 400 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm42428-201ENSMUST00000198677 302 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm18620-201ENSMUST00000222295 324 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm37652-201ENSMUST00000195290 2095 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hmgb1P63158 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hmgb1P63158 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.57□□□□□ -1.36
Hmgb1P63158 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hmgb1P63158 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Hmgb1P63158 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hmgb1P63158 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm13770-201ENSMUST00000117149 305 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm12939-201ENSMUST00000117303 165 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm14706-201ENSMUST00000117744 255 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm7494-201ENSMUST00000121248 441 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm14122-201ENSMUST00000122076 973 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm2389-201ENSMUST00000160487 189 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm24103-201ENSMUST00000174930 77 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm28080-201ENSMUST00000188552 722 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm8581-201ENSMUST00000188636 890 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Ighv10-4-201ENSMUST00000193702 299 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm43368-201ENSMUST00000200638 409 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm44053-201ENSMUST00000203364 929 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm17834-201ENSMUST00000204322 891 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm44163-201ENSMUST00000205140 475 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm18559-201ENSMUST00000208249 604 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm5176-202ENSMUST00000220267 583 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Gm9292-201ENSMUST00000222008 710 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.56□□□□□ -1.36
Hmgb1P63158 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hmgb1P63158 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hmgb1P63158 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.55□□□□□ -1.36
Hmgb1P63158 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.55□□□□□ -1.36
Hmgb1P63158 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.55□□□□□ -1.36
Hmgb1P63158 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Hmgb1P63158 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.55□□□□□ -1.36
Hmgb1P63158 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hmgb1P63158 Gm7927-201ENSMUST00000118818 880 ntBASIC6.55□□□□□ -1.36
Hmgb1P63158 Gm12438-201ENSMUST00000122034 336 ntBASIC6.55□□□□□ -1.36
Hmgb1P63158 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Hmgb1P63158 Gm3242-201ENSMUST00000171273 485 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms