Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Mir1970-201ENSMUST00000157839 104 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm23071-201ENSMUST00000158242 115 ntBASIC6.64□□□□□ -1.35
Sox1P53783 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm8192-201ENSMUST00000182196 958 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Mir6411-201ENSMUST00000183556 108 ntBASIC6.64□□□□□ -1.35
Sox1P53783 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.64□□□□□ -1.35
Sox1P53783 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox1P53783 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm43712-201ENSMUST00000198020 291 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm43505-201ENSMUST00000200579 139 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm43368-201ENSMUST00000200638 409 ntBASIC6.64□□□□□ -1.35
Sox1P53783 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.64□□□□□ -1.35
Sox1P53783 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.64□□□□□ -1.35
Sox1P53783 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Sox1P53783 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox1P53783 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox1P53783 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.64□□□□□ -1.35
Sox1P53783 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Sox1P53783 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox1P53783 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox1P53783 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox1P53783 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Gm22778-201ENSMUST00000104090 128 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm23133-201ENSMUST00000104255 135 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm12268-201ENSMUST00000118398 442 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm8855-201ENSMUST00000118888 878 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.63□□□□□ -1.35
Sox1P53783 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm7670-201ENSMUST00000121272 641 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm24635-201ENSMUST00000122712 128 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Gm23669-201ENSMUST00000157470 128 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm23591-201ENSMUST00000157663 286 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm6155-201ENSMUST00000173735 341 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms